The Ratio Calculator is an ImageJ plugin. Click here to go to the Bitbucket project page.
A detailed description of the Ratio Calculator plugin and downstream analyses can be found in the manual.

I have a large collection of R/Python/Bash scripts for processing and analyzing genotype data. It is currently maintained in a restricted access GitLab repository to which MPI employees can get access.

I have written small R Shiny apps for visualizing genetic MDS components, for visualizing genetic admixture percentages (also available for Dodecad), and implemented the nMonte3 algorithm in R Shiny for predicting populations from DIYDodecad admixture percentages.

The Mitotracker is a Matlab application. It is still being optimized before release.

I have also created a PHP/SQL-based fly stock collection database. It is not good enough for public release yet, but if you are interested in it, just contact me.